Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Gm9870-201ENSMUST00000063874 645 ntBASIC12.24□□□□□ -0.45
Vamp8O70404 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Vamp8O70404 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Vamp8O70404 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vamp8O70404 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.23□□□□□ -0.45
Vamp8O70404 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vamp8O70404 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vamp8O70404 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vamp8O70404 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vamp8O70404 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.22□□□□□ -0.45
Vamp8O70404 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vamp8O70404 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vamp8O70404 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vamp8O70404 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vamp8O70404 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vamp8O70404 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vamp8O70404 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Vamp8O70404 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Gm27502-201ENSMUST00000183495 199 ntBASIC12.21□□□□□ -0.45
Vamp8O70404 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.21□□□□□ -0.45
Vamp8O70404 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vamp8O70404 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vamp8O70404 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vamp8O70404 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp8O70404 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp8O70404 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.21□□□□□ -0.46
Vamp8O70404 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Vamp8O70404 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Vamp8O70404 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Vamp8O70404 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp8O70404 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp8O70404 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vamp8O70404 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms