Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm7230-201ENSMUST00000173026 815 ntBASIC16.28■□□□□ 0.2
Abca4O35600 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Mir6956-201ENSMUST00000183598 62 ntBASIC16.28■□□□□ 0.2
Abca4O35600 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Abca4O35600 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.28■□□□□ 0.2
Abca4O35600 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.28■□□□□ 0.2
Abca4O35600 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Abca4O35600 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.28■□□□□ 0.2
Abca4O35600 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.28■□□□□ 0.2
Abca4O35600 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.28■□□□□ 0.2
Abca4O35600 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Abca4O35600 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Abca4O35600 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.27■□□□□ 0.2
Abca4O35600 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Abca4O35600 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.27■□□□□ 0.2
Abca4O35600 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.27■□□□□ 0.2
Abca4O35600 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abca4O35600 Gm6089-201ENSMUST00000197666 938 ntBASIC16.27■□□□□ 0.2
Abca4O35600 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.27■□□□□ 0.2
Abca4O35600 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abca4O35600 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abca4O35600 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca4O35600 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca4O35600 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca4O35600 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Abca4O35600 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca4O35600 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Abca4O35600 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca4O35600 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.27■□□□□ 0.19
Abca4O35600 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.27■□□□□ 0.19
Abca4O35600 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Abca4O35600 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca4O35600 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Abca4O35600 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca4O35600 Gm20949-201ENSMUST00000206478 952 ntBASIC16.26■□□□□ 0.19
Abca4O35600 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca4O35600 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca4O35600 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.25■□□□□ 0.19
Abca4O35600 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.25■□□□□ 0.19
Abca4O35600 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Abca4O35600 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.25■□□□□ 0.19
Abca4O35600 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.25■□□□□ 0.19
Abca4O35600 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Abca4O35600 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.25■□□□□ 0.19
Abca4O35600 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.24■□□□□ 0.19
Abca4O35600 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Abca4O35600 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Gm27628-201ENSMUST00000184911 107 ntBASIC16.24■□□□□ 0.19
Abca4O35600 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Abca4O35600 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Abca4O35600 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.24■□□□□ 0.19
Abca4O35600 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.24■□□□□ 0.19
Abca4O35600 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Abca4O35600 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.24■□□□□ 0.19
Abca4O35600 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca4O35600 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Abca4O35600 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.23■□□□□ 0.19
Abca4O35600 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Abca4O35600 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.23■□□□□ 0.19
Abca4O35600 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms