Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.99□□□□□ -0.65
Pkd1O08852 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.99□□□□□ -0.65
Pkd1O08852 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pkd1O08852 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pkd1O08852 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pkd1O08852 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.99□□□□□ -0.65
Pkd1O08852 Gm25911-201ENSMUST00000157621 56 ntBASIC10.99□□□□□ -0.65
Pkd1O08852 Gm9727-201ENSMUST00000161387 555 ntBASIC10.99□□□□□ -0.65
Pkd1O08852 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.99□□□□□ -0.65
Pkd1O08852 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Pkd1O08852 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.99□□□□□ -0.65
Pkd1O08852 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pkd1O08852 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Pkd1O08852 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pkd1O08852 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC10.98□□□□□ -0.65
Pkd1O08852 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pkd1O08852 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.98□□□□□ -0.65
Pkd1O08852 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Gm6376-201ENSMUST00000209407 580 ntBASIC10.98□□□□□ -0.65
Pkd1O08852 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.98□□□□□ -0.65
Pkd1O08852 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.98□□□□□ -0.65
Pkd1O08852 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pkd1O08852 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Gm13312-201ENSMUST00000119631 718 ntBASIC10.98□□□□□ -0.65
Pkd1O08852 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.98□□□□□ -0.65
Pkd1O08852 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.98□□□□□ -0.65
Pkd1O08852 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.98□□□□□ -0.65
Pkd1O08852 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC10.98□□□□□ -0.65
Pkd1O08852 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pkd1O08852 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pkd1O08852 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.97□□□□□ -0.65
Pkd1O08852 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Pkd1O08852 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.97□□□□□ -0.65
Pkd1O08852 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.97□□□□□ -0.65
Pkd1O08852 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pkd1O08852 Psmb5-202ENSMUST00000227257 622 ntBASIC10.97□□□□□ -0.65
Pkd1O08852 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pkd1O08852 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Pkd1O08852 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC10.97□□□□□ -0.65
Pkd1O08852 BC021767-201ENSMUST00000126387 1716 ntBASIC10.97□□□□□ -0.65
Pkd1O08852 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Gm15467-201ENSMUST00000120582 445 ntBASIC10.97□□□□□ -0.65
Pkd1O08852 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.97□□□□□ -0.65
Pkd1O08852 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pkd1O08852 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Gm14822-201ENSMUST00000122247 291 ntBASIC10.96□□□□□ -0.65
Pkd1O08852 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.96□□□□□ -0.65
Pkd1O08852 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Gm19721-201ENSMUST00000195284 1764 ntBASIC10.96□□□□□ -0.65
Pkd1O08852 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pkd1O08852 Gm14494-201ENSMUST00000118786 435 ntBASIC10.96□□□□□ -0.65
Pkd1O08852 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms