Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Polr2jO08740 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Polr2jO08740 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Polr2jO08740 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.63■□□□□ 0.25
Polr2jO08740 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Polr2jO08740 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Polr2jO08740 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Haglr-201ENSMUST00000100000 2085 ntBASIC16.62■□□□□ 0.25
Polr2jO08740 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Polr2jO08740 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Gm13401-201ENSMUST00000117074 291 ntBASIC16.62■□□□□ 0.25
Polr2jO08740 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Polr2jO08740 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Polr2jO08740 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Polr2jO08740 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Polr2jO08740 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Polr2jO08740 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Polr2jO08740 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Polr2jO08740 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.62■□□□□ 0.25
Polr2jO08740 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Polr2jO08740 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.61■□□□□ 0.25
Polr2jO08740 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.61■□□□□ 0.25
Polr2jO08740 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Polr2jO08740 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Polr2jO08740 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.61■□□□□ 0.25
Polr2jO08740 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.61■□□□□ 0.25
Polr2jO08740 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Polr2jO08740 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Polr2jO08740 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Gm10849-201ENSMUST00000100397 618 ntBASIC16.6■□□□□ 0.25
Polr2jO08740 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.6■□□□□ 0.25
Polr2jO08740 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Polr2jO08740 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.6■□□□□ 0.25
Polr2jO08740 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Polr2jO08740 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Polr2jO08740 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Gm11927-201ENSMUST00000118472 759 ntBASIC16.59■□□□□ 0.25
Polr2jO08740 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Gm26571-201ENSMUST00000181399 666 ntBASIC16.59■□□□□ 0.25
Polr2jO08740 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.59■□□□□ 0.25
Polr2jO08740 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Polr2jO08740 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Polr2jO08740 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Polr2jO08740 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Polr2jO08740 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Polr2jO08740 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Polr2jO08740 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Polr2jO08740 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Polr2jO08740 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.58■□□□□ 0.24
Polr2jO08740 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms