Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Gm18958-201ENSMUST00000174258 762 ntBASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim34bJ3QNR8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim34bJ3QNR8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Gm11355-201ENSMUST00000121120 306 ntBASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Gm26039-201ENSMUST00000158152 144 ntBASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Grk6-206ENSMUST00000224995 2971 ntBASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim34bJ3QNR8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim34bJ3QNR8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Gm7284-201ENSMUST00000131667 944 ntBASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Gm10566-201ENSMUST00000086739 996 ntBASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim34bJ3QNR8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim34bJ3QNR8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim34bJ3QNR8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Trim34bJ3QNR8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim34bJ3QNR8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms