Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6576-201ENSMUST00000169678 883 ntBASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11249-201ENSMUST00000117071 859 ntBASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12896-201ENSMUST00000118430 226 ntBASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.17■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms