Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Mir7071-201ENSMUST00000184847 69 ntBASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Mtag2-201ENSMUST00000058665 714 ntBASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms