Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm5921-201ENSMUST00000075898 882 ntBASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-3A0A075B6A4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.97□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav12d-3A0A075B6A4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-3A0A075B6A4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.96□□□□□ -0.34
Trav12d-3A0A075B6A4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-3A0A075B6A4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-3A0A075B6A4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-3A0A075B6A4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-3A0A075B6A4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-3A0A075B6A4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-3A0A075B6A4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12d-3A0A075B6A4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms