Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm10418-201ENSMUST00000100943 576 ntBASIC13.8□□□□□ -0.2
Trav17A0A075B655 Mir8112-201ENSMUST00000184382 131 ntBASIC13.8□□□□□ -0.2
Trav17A0A075B655 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.8□□□□□ -0.2
Trav17A0A075B655 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav17A0A075B655 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav17A0A075B655 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav17A0A075B655 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.78□□□□□ -0.2
Trav17A0A075B655 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav17A0A075B655 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav17A0A075B655 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav17A0A075B655 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav17A0A075B655 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Trav17A0A075B655 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav17A0A075B655 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.77□□□□□ -0.21
Trav17A0A075B655 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav17A0A075B655 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.76□□□□□ -0.21
Trav17A0A075B655 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav17A0A075B655 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav17A0A075B655 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms