Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav8-1A0A075B641 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8-1A0A075B641 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8-1A0A075B641 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8-1A0A075B641 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8-1A0A075B641 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8-1A0A075B641 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8-1A0A075B641 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8-1A0A075B641 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8-1A0A075B641 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8-1A0A075B641 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8-1A0A075B641 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms