Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm2399-201ENSMUST00000104944 225 ntBASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms