Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm43326-201ENSMUST00000198459 1638 ntBASIC6.34□□□□□ -1.39
Ddx54Q8K4L0 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Ddx54Q8K4L0 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ddx54Q8K4L0 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx54Q8K4L0 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.34□□□□□ -1.39
Ddx54Q8K4L0 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx54Q8K4L0 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ddx54Q8K4L0 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Ddx54Q8K4L0 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm8989-201ENSMUST00000184782 7275 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm26075-201ENSMUST00000104062 121 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm23294-201ENSMUST00000104150 164 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Snord72-201ENSMUST00000104549 81 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm11699-201ENSMUST00000119016 401 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm13132-201ENSMUST00000121194 472 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm13009-201ENSMUST00000121307 267 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm12872-201ENSMUST00000121835 320 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm26350-201ENSMUST00000157531 288 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm25386-201ENSMUST00000157814 288 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm27579-201ENSMUST00000158113 63 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm25718-201ENSMUST00000158632 118 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm11394-201ENSMUST00000181421 517 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm29489-201ENSMUST00000188934 324 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm44474-201ENSMUST00000196525 127 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm44063-201ENSMUST00000203307 376 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm21112-201ENSMUST00000212224 578 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm23447-201ENSMUST00000082798 163 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Gm26165-201ENSMUST00000083791 138 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx54Q8K4L0 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm42843-201ENSMUST00000196328 3616 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm14771-201ENSMUST00000118249 203 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm22816-201ENSMUST00000157450 117 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm24504-201ENSMUST00000157679 100 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm8292-201ENSMUST00000162574 396 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm37757-201ENSMUST00000193072 210 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm44523-201ENSMUST00000205616 417 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 AC159621.1-201ENSMUST00000223249 163 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm23939-201ENSMUST00000082880 133 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm25126-201ENSMUST00000083343 102 ntBASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx54Q8K4L0 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 AC131720.1-201ENSMUST00000218629 2132 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm10552-201ENSMUST00000113396 372 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm14706-201ENSMUST00000117744 255 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm11698-201ENSMUST00000117948 455 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm42830-201ENSMUST00000196642 313 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm44083-201ENSMUST00000203114 337 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm44779-201ENSMUST00000206937 708 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Gm45499-201ENSMUST00000211656 280 ntBASIC6.31□□□□□ -1.4
Ddx54Q8K4L0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 152.8 ms