Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm5653-201ENSMUST00000223393 1337 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm22713-201ENSMUST00000116895 130 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm44161-201ENSMUST00000203532 253 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm25466-201ENSMUST00000103995 132 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm12871-201ENSMUST00000118758 438 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Mir497-201ENSMUST00000200557 84 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm43295-201ENSMUST00000201439 412 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Mir215-201ENSMUST00000083628 112 ntBASIC1.53□□□□□ -2.16
Ush2AQ2QI47 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Gm24213-201ENSMUST00000158255 258 ntBASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Gm26933-201ENSMUST00000182320 827 ntBASIC1.53□□□□□ -2.17
Ush2AQ2QI47 Gm43341-201ENSMUST00000200104 1308 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm43879-201ENSMUST00000203811 3760 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm13100-201ENSMUST00000117157 1439 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm42585-201ENSMUST00000198731 4020 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm16017-201ENSMUST00000119834 208 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm8807-201ENSMUST00000179328 492 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Igkv1-115-201ENSMUST00000198714 302 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm19154-201ENSMUST00000223330 940 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm7957-201ENSMUST00000207404 2602 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm12706-201ENSMUST00000121588 698 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm29602-201ENSMUST00000186887 442 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm28623-201ENSMUST00000187219 192 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm8675-201ENSMUST00000201408 1856 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm22469-201ENSMUST00000104118 133 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm11943-201ENSMUST00000119473 327 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm15166-201ENSMUST00000120790 385 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm13511-201ENSMUST00000121167 363 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Mir3968-201ENSMUST00000175355 100 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 AC126440.1-201ENSMUST00000227098 349 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms