Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Mir541-201ENSMUST00000102097 90 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm24435-201ENSMUST00000157886 110 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm23921-201ENSMUST00000175258 107 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm27853-201ENSMUST00000184176 250 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm45403-201ENSMUST00000209453 276 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 AC123860.1-201ENSMUST00000228033 481 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Snord59a-201ENSMUST00000082844 74 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdhb3Q91XZ7 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm11822-201ENSMUST00000119177 415 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 AA413626-201ENSMUST00000121125 494 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm22145-201ENSMUST00000157396 148 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm24676-201ENSMUST00000158758 75 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Scarna10-201ENSMUST00000158992 325 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm20620-201ENSMUST00000177528 168 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm7626-201ENSMUST00000195801 353 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm44473-201ENSMUST00000204039 152 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm38574-201ENSMUST00000211855 640 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm18921-201ENSMUST00000221798 366 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm7040-201ENSMUST00000223271 443 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm26055-201ENSMUST00000083038 107 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb3Q91XZ7 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.84□□□□□ -1.48
Pcdhb3Q91XZ7 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Pcdhb3Q91XZ7 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Pcdhb3Q91XZ7 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Pcdhb3Q91XZ7 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Pcdhb3Q91XZ7 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm16242-201ENSMUST00000117741 334 ntBASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm4916-201ENSMUST00000126139 642 ntBASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm4660-201ENSMUST00000131499 403 ntBASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdhb3Q91XZ7 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms