Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm37658-201ENSMUST00000192672 315 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.97□□□□□ -1.61
Usp4P35123 Gm9238-201ENSMUST00000196181 329 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm43652-201ENSMUST00000196219 675 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm42594-201ENSMUST00000199511 246 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm42828-201ENSMUST00000199669 469 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm7721-201ENSMUST00000200446 546 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm34224-201ENSMUST00000204606 364 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm45081-201ENSMUST00000206281 572 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm45171-201ENSMUST00000206360 736 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.97□□□□□ -1.61
Usp4P35123 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.97□□□□□ -1.61
Usp4P35123 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm19219-201ENSMUST00000215863 724 ntBASIC4.97□□□□□ -1.61
Usp4P35123 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm29785-201ENSMUST00000217033 383 ntBASIC4.97□□□□□ -1.61
Usp4P35123 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Usp4P35123 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Usp4P35123 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Usp4P35123 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Usp4P35123 Gm6065-201ENSMUST00000081336 492 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm25147-201ENSMUST00000083030 105 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm25008-201ENSMUST00000083809 81 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm23796-201ENSMUST00000084011 160 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Olfr203-201ENSMUST00000089305 924 ntBASIC4.97□□□□□ -1.61
Usp4P35123 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Usp4P35123 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Usp4P35123 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Usp4P35123 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.97□□□□□ -1.61
Usp4P35123 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.97□□□□□ -1.61
Usp4P35123 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Usp4P35123 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.96□□□□□ -1.61
Usp4P35123 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Usp4P35123 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm13331-201ENSMUST00000117500 448 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm14669-201ENSMUST00000118841 250 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm13213-201ENSMUST00000119668 474 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm15745-201ENSMUST00000119807 115 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm16017-201ENSMUST00000119834 208 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm14883-201ENSMUST00000120179 157 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm12095-201ENSMUST00000121962 816 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm26255-201ENSMUST00000122492 103 ntBASIC4.96□□□□□ -1.62
Usp4P35123 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm26153-201ENSMUST00000157433 127 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm23852-201ENSMUST00000158376 77 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm25365-201ENSMUST00000158852 121 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm20657-201ENSMUST00000177079 515 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm26556-201ENSMUST00000180645 320 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Mir6943-201ENSMUST00000185186 66 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm28118-201ENSMUST00000185957 294 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm20203-201ENSMUST00000192352 332 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm38019-201ENSMUST00000195133 380 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm32453-201ENSMUST00000204183 456 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Gm31931-201ENSMUST00000219666 222 ntBASIC4.96□□□□□ -1.62
Usp4P35123 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.96□□□□□ -1.62
Usp4P35123 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.96□□□□□ -1.62
Usp4P35123 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.96□□□□□ -1.62
Usp4P35123 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Usp4P35123 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Svet1-201ENSMUST00000209370 3940 ntBASIC4.96□□□□□ -1.62
Usp4P35123 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Usp4P35123 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.96□□□□□ -1.62
Usp4P35123 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Usp4P35123 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Usp4P35123 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Usp4P35123 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Usp4P35123 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Usp4P35123 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.95□□□□□ -1.62
Usp4P35123 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Usp4P35123 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Usp4P35123 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Usp4P35123 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms