Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL731533.2-201ENST00000607898 578 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC090373.1-201ENST00000623955 603 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC020978.9-201ENST00000624380 1141 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AC125603.4-201ENST00000621942 2699 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 AL031123.3-201ENST00000623345 1837 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 EEF1A1P3-201ENST00000417549 1385 ntBASIC6.94□□□□□ -1.3
SNX18Q96RF0 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC6.94□□□□□ -1.3
SNX18Q96RF0 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SNX18Q96RF0 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AL138847.1-201ENST00000258651 546 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC083799.1-201ENST00000366451 910 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 SNORA70I-201ENST00000384544 135 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 VN1R13P-201ENST00000406212 885 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 IGLC6-201ENST00000410078 317 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AL021939.1-201ENST00000441868 886 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 FGF12-206ENST00000450716 768 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC104389.2-201ENST00000450768 887 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 MED28P8-201ENST00000454831 521 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 RN7SL272P-201ENST00000487762 289 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AL031073.1-201ENST00000503029 1139 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC021269.1-201ENST00000526860 705 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC136944.5-201ENST00000573021 151 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 MIR3689C-201ENST00000581239 72 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AF186192.2-204ENST00000581667 524 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 YTHDF2P1-201ENST00000604759 1271 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC073389.3-201ENST00000609434 935 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AL133520.1-201ENST00000610430 700 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC123788.2-201ENST00000612290 283 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC012557.3-201ENST00000626439 255 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 AC013268.3-201ENST00000262716 2324 ntBASIC6.93□□□□□ -1.3
SNX18Q96RF0 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.93□□□□□ -1.3
SNX18Q96RF0 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SNX18Q96RF0 GPI-202ENST00000415930 4000 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 MIPEPP2-201ENST00000422560 1819 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms