Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm25379-201ENSMUST00000104338 114 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm25498-201ENSMUST00000104424 129 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm26321-201ENSMUST00000157740 242 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm24636-201ENSMUST00000158673 288 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm27245-201ENSMUST00000184385 376 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm29104-201ENSMUST00000186304 222 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm36935-201ENSMUST00000192526 292 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm4525-201ENSMUST00000198831 254 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm34424-201ENSMUST00000213400 782 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm4012-201ENSMUST00000221504 581 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm46424-201ENSMUST00000221567 168 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm24924-201ENSMUST00000084007 164 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim35Q8C006 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim35Q8C006 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.91□□□□□ -1.3
Trim35Q8C006 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim35Q8C006 Mir667-201ENSMUST00000102441 92 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm25311-201ENSMUST00000104136 132 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm13137-201ENSMUST00000118035 345 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm13444-201ENSMUST00000119445 522 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim35Q8C006 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.9□□□□□ -1.3
Trim35Q8C006 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim35Q8C006 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm37479-201ENSMUST00000194169 3841 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm8182-201ENSMUST00000197863 769 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Gm43199-201ENSMUST00000200019 307 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 AC069074.2-201ENSMUST00000217819 428 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim35Q8C006 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim35Q8C006 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim35Q8C006 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Trim35Q8C006 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.9□□□□□ -1.3
Trim35Q8C006 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim35Q8C006 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim35Q8C006 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim35Q8C006 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Trim35Q8C006 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Trim35Q8C006 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Trim35Q8C006 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.9□□□□□ -1.31
Trim35Q8C006 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.9□□□□□ -1.31
Trim35Q8C006 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim35Q8C006 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim35Q8C006 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim35Q8C006 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim35Q8C006 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim35Q8C006 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim35Q8C006 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim35Q8C006 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim35Q8C006 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Trim35Q8C006 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim35Q8C006 Gm25344-201ENSMUST00000104503 132 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms