Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm44219-201ENSMUST00000203005 273 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Gm8319-201ENSMUST00000205708 641 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Gm6474-201ENSMUST00000223250 699 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Gm23686-201ENSMUST00000083241 164 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Gm22577-201ENSMUST00000083731 109 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.25□□□□□ -1.57
Trim39Q9ESN2 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim39Q9ESN2 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm13250-201ENSMUST00000117209 753 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm15073-201ENSMUST00000117432 634 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm13772-201ENSMUST00000118431 317 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm22599-201ENSMUST00000157597 132 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Mir6361-201ENSMUST00000185079 101 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm37338-201ENSMUST00000191986 127 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm37029-201ENSMUST00000195773 239 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm43105-201ENSMUST00000202987 459 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm44239-201ENSMUST00000204228 271 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm45119-201ENSMUST00000207612 199 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm45678-201ENSMUST00000210509 295 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm45313-201ENSMUST00000210584 178 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 LOC665443-201ENSMUST00000212284 796 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm23737-201ENSMUST00000082547 159 ntBASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim39Q9ESN2 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm20486-201ENSMUST00000101544 128 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm24640-201ENSMUST00000116949 126 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm22626-201ENSMUST00000116990 126 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm15844-201ENSMUST00000118016 576 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm12509-201ENSMUST00000118033 609 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm12852-201ENSMUST00000119478 719 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm12488-201ENSMUST00000122449 499 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm10177-201ENSMUST00000160052 444 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm24761-201ENSMUST00000179589 127 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm24488-201ENSMUST00000179934 127 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm25701-201ENSMUST00000179988 127 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm26431-201ENSMUST00000180199 127 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm27165-201ENSMUST00000183951 232 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Mir6989-201ENSMUST00000184812 65 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm19498-201ENSMUST00000191128 331 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm38150-201ENSMUST00000192996 452 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm37881-201ENSMUST00000193001 421 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm18427-201ENSMUST00000195422 515 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm42886-201ENSMUST00000199214 466 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm6105-201ENSMUST00000200580 624 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm42961-201ENSMUST00000202023 181 ntBASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Trim39Q9ESN2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms