Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col2a1P28481 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.67□□□□□ -1.82
Col2a1P28481 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col2a1P28481 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col2a1P28481 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col2a1P28481 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col2a1P28481 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.67□□□□□ -1.82
Col2a1P28481 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm12222-201ENSMUST00000121368 260 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm16471-201ENSMUST00000121940 618 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.67□□□□□ -1.82
Col2a1P28481 Mir3103-201ENSMUST00000175474 67 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm20773-201ENSMUST00000178940 681 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col2a1P28481 Gm28339-201ENSMUST00000185845 696 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm28282-201ENSMUST00000186072 186 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm28113-201ENSMUST00000188280 229 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm44607-201ENSMUST00000205611 1090 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm19885-201ENSMUST00000212853 343 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm18225-201ENSMUST00000216708 742 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Gm7588-201ENSMUST00000216866 571 ntBASIC3.67□□□□□ -1.82
Col2a1P28481 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col2a1P28481 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Col2a1P28481 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col2a1P28481 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.66□□□□□ -1.82
Col2a1P28481 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.66□□□□□ -1.82
Col2a1P28481 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col2a1P28481 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Col2a1P28481 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col2a1P28481 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.66□□□□□ -1.82
Col2a1P28481 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col2a1P28481 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col2a1P28481 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col2a1P28481 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col2a1P28481 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col2a1P28481 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Col2a1P28481 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col2a1P28481 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Col2a1P28481 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC3.66□□□□□ -1.82
Col2a1P28481 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.66□□□□□ -1.82
Col2a1P28481 Gm44223-201ENSMUST00000204854 114 ntBASIC3.66□□□□□ -1.82
Col2a1P28481 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.66□□□□□ -1.82
Col2a1P28481 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.66□□□□□ -1.82
Col2a1P28481 AC211878.5-201ENSMUST00000221697 409 ntBASIC3.66□□□□□ -1.82
Col2a1P28481 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.66□□□□□ -1.82
Col2a1P28481 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col2a1P28481 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col2a1P28481 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col2a1P28481 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.65□□□□□ -1.82
Col2a1P28481 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col2a1P28481 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Col2a1P28481 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col2a1P28481 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col2a1P28481 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col2a1P28481 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col2a1P28481 Gm16021-201ENSMUST00000121176 219 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Gm14363-201ENSMUST00000122304 409 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Gm19791-201ENSMUST00000180398 859 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC3.65□□□□□ -1.83
Col2a1P28481 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Gm42581-201ENSMUST00000201774 966 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col2a1P28481 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.65□□□□□ -1.83
Col2a1P28481 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col2a1P28481 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Col2a1P28481 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.65□□□□□ -1.83
Col2a1P28481 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col2a1P28481 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col2a1P28481 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col2a1P28481 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Col2a1P28481 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Gm12819-201ENSMUST00000122223 629 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.64□□□□□ -1.83
Col2a1P28481 Gm21999-201ENSMUST00000165985 387 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col2a1P28481 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col2a1P28481 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 Gm19039-201ENSMUST00000204363 575 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 Gm19126-201ENSMUST00000207896 509 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 Gm25581-201ENSMUST00000083410 164 ntBASIC3.64□□□□□ -1.83
Col2a1P28481 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col2a1P28481 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms