Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Gm7291-201ENSMUST00000199147 382 ntBASIC13.34□□□□□ -0.27
PdfS4R2K0 AV356131-201ENSMUST00000206201 750 ntBASIC13.34□□□□□ -0.27
PdfS4R2K0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Gm10033-202ENSMUST00000211874 928 ntBASIC13.34□□□□□ -0.27
PdfS4R2K0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.34□□□□□ -0.27
PdfS4R2K0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.34□□□□□ -0.27
PdfS4R2K0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PdfS4R2K0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PdfS4R2K0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PdfS4R2K0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PdfS4R2K0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Gm13234-201ENSMUST00000120010 747 ntBASIC13.33□□□□□ -0.28
PdfS4R2K0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.33□□□□□ -0.28
PdfS4R2K0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.33□□□□□ -0.28
PdfS4R2K0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PdfS4R2K0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
PdfS4R2K0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.32□□□□□ -0.28
PdfS4R2K0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PdfS4R2K0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.32□□□□□ -0.28
PdfS4R2K0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
PdfS4R2K0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PdfS4R2K0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.31□□□□□ -0.28
PdfS4R2K0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PdfS4R2K0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.31□□□□□ -0.28
PdfS4R2K0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PdfS4R2K0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.31□□□□□ -0.28
PdfS4R2K0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PdfS4R2K0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PdfS4R2K0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.3□□□□□ -0.28
PdfS4R2K0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PdfS4R2K0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
PdfS4R2K0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms