Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ClcnkaQ9WUB7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Gm18025-201ENSMUST00000221733 862 ntBASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.97■□□□□ 0.15
ClcnkaQ9WUB7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Gm11643-201ENSMUST00000119578 864 ntBASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Gm13168-201ENSMUST00000121771 632 ntBASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Gm27011-201ENSMUST00000182352 972 ntBASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Gm42545-201ENSMUST00000202755 922 ntBASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ClcnkaQ9WUB7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ClcnkaQ9WUB7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ClcnkaQ9WUB7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ClcnkaQ9WUB7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ClcnkaQ9WUB7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ClcnkaQ9WUB7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.95■□□□□ 0.14
ClcnkaQ9WUB7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ClcnkaQ9WUB7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms