Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Gm12260-201ENSMUST00000122447 411 ntBASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Gm6736-201ENSMUST00000166583 948 ntBASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Phf7-203ENSMUST00000226565 1971 ntBASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col4a4Q9QZR9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Gm13186-201ENSMUST00000118031 316 ntBASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col4a4Q9QZR9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Col4a4Q9QZR9 Gm14822-201ENSMUST00000122247 291 ntBASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Gm10576-201ENSMUST00000191927 825 ntBASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Psmb5-202ENSMUST00000227257 622 ntBASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col4a4Q9QZR9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.44■□□□□ 0.38
Col4a4Q9QZR9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.43■□□□□ 0.38
Col4a4Q9QZR9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Gm15467-201ENSMUST00000120582 445 ntBASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Gm7230-201ENSMUST00000173026 815 ntBASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a4Q9QZR9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms