Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lima1Q9ERG0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lima1Q9ERG0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lima1Q9ERG0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.17■□□□□ 0.34
Lima1Q9ERG0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.16■□□□□ 0.34
Lima1Q9ERG0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Gm37179-201ENSMUST00000194862 823 ntBASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lima1Q9ERG0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lima1Q9ERG0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Lima1Q9ERG0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lima1Q9ERG0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lima1Q9ERG0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lima1Q9ERG0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Gm13148-201ENSMUST00000118892 745 ntBASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lima1Q9ERG0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lima1Q9ERG0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms