Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tubb3Q9ERD7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tubb3Q9ERD7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Mir6982-201ENSMUST00000184354 68 ntBASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Tubb3Q9ERD7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tubb3Q9ERD7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.2■□□□□ 0.34
Tubb3Q9ERD7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms