Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf6Q9DBU5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
Rnf6Q9DBU5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf6Q9DBU5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rnf6Q9DBU5 Gm24841-201ENSMUST00000158676 357 ntBASIC18.64■□□□□ 0.57
Rnf6Q9DBU5 Gm27011-201ENSMUST00000182352 972 ntBASIC18.64■□□□□ 0.57
Rnf6Q9DBU5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf6Q9DBU5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf6Q9DBU5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf6Q9DBU5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.63■□□□□ 0.57
Rnf6Q9DBU5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rnf6Q9DBU5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Gm22240-201ENSMUST00000175225 82 ntBASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf6Q9DBU5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Mir1199-201ENSMUST00000117015 119 ntBASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rnf6Q9DBU5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.59■□□□□ 0.57
Rnf6Q9DBU5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.59■□□□□ 0.57
Rnf6Q9DBU5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf6Q9DBU5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf6Q9DBU5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf6Q9DBU5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf6Q9DBU5 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.59■□□□□ 0.57
Rnf6Q9DBU5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf6Q9DBU5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms