Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vps33aQ9D2N9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps33aQ9D2N9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps33aQ9D2N9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps33aQ9D2N9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps33aQ9D2N9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Vps33aQ9D2N9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Vps33aQ9D2N9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vps33aQ9D2N9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vps33aQ9D2N9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms