Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssbp1Q9CYR0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssbp1Q9CYR0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssbp1Q9CYR0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssbp1Q9CYR0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssbp1Q9CYR0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms