Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Krt88Q9CPR6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Krt88Q9CPR6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.72■□□□□ 0.11
Krt88Q9CPR6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Krt88Q9CPR6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt88Q9CPR6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Krt88Q9CPR6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt88Q9CPR6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Gm13234-201ENSMUST00000120010 747 ntBASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt88Q9CPR6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Krt88Q9CPR6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.67■□□□□ 0.1
Krt88Q9CPR6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Krt88Q9CPR6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms