Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rQ99PI8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Gm21814-202ENSMUST00000203277 873 ntBASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Gm4974-201ENSMUST00000209974 875 ntBASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Rtn4rQ99PI8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Gm12085-201ENSMUST00000119263 940 ntBASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4rQ99PI8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4rQ99PI8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Gm5417-201ENSMUST00000079706 384 ntBASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4rQ99PI8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms