Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Haglr-201ENSMUST00000100000 2085 ntBASIC15.59■□□□□ 0.09
Raf1Q99N57 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Raf1Q99N57 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.58■□□□□ 0.09
Raf1Q99N57 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Raf1Q99N57 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.58■□□□□ 0.09
Raf1Q99N57 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Raf1Q99N57 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.58■□□□□ 0.08
Raf1Q99N57 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.58■□□□□ 0.08
Raf1Q99N57 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.58■□□□□ 0.08
Raf1Q99N57 Trmt13-210ENSMUST00000198454 880 ntBASIC15.58■□□□□ 0.08
Raf1Q99N57 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.58■□□□□ 0.08
Raf1Q99N57 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.58■□□□□ 0.08
Raf1Q99N57 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.58■□□□□ 0.08
Raf1Q99N57 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.58■□□□□ 0.08
Raf1Q99N57 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Raf1Q99N57 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Raf1Q99N57 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.57■□□□□ 0.08
Raf1Q99N57 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Gm37856-201ENSMUST00000191634 999 ntBASIC15.57■□□□□ 0.08
Raf1Q99N57 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.57■□□□□ 0.08
Raf1Q99N57 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Raf1Q99N57 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Raf1Q99N57 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Raf1Q99N57 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.56■□□□□ 0.08
Raf1Q99N57 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.56■□□□□ 0.08
Raf1Q99N57 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.56■□□□□ 0.08
Raf1Q99N57 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Raf1Q99N57 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Raf1Q99N57 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Raf1Q99N57 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Raf1Q99N57 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Raf1Q99N57 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Raf1Q99N57 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Raf1Q99N57 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.55■□□□□ 0.08
Raf1Q99N57 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.55■□□□□ 0.08
Raf1Q99N57 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.55■□□□□ 0.08
Raf1Q99N57 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.55■□□□□ 0.08
Raf1Q99N57 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raf1Q99N57 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms