Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col25a1Q99MQ5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.96■□□□□ 0.46
Col25a1Q99MQ5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col25a1Q99MQ5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Gm15467-201ENSMUST00000120582 445 ntBASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col25a1Q99MQ5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Mir5131-201ENSMUST00000175426 93 ntBASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Gm27397-201ENSMUST00000184997 107 ntBASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col25a1Q99MQ5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Gm24513-201ENSMUST00000174964 138 ntBASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col25a1Q99MQ5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms