Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Gm10033-202ENSMUST00000211874 928 ntBASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh18Q8VHR0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh18Q8VHR0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh18Q8VHR0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Gm18284-201ENSMUST00000172604 624 ntBASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh18Q8VHR0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh18Q8VHR0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh18Q8VHR0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh18Q8VHR0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh18Q8VHR0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh18Q8VHR0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms