Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cystm1Q8K353 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 AC133083.1-201ENSMUST00000221736 2209 ntBASIC10.91□□□□□ -0.66
Cystm1Q8K353 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Gm13234-201ENSMUST00000120010 747 ntBASIC10.91□□□□□ -0.66
Cystm1Q8K353 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Gm37179-201ENSMUST00000194862 823 ntBASIC10.91□□□□□ -0.66
Cystm1Q8K353 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cystm1Q8K353 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Gm13216-201ENSMUST00000117145 591 ntBASIC10.9□□□□□ -0.66
Cystm1Q8K353 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC10.9□□□□□ -0.66
Cystm1Q8K353 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cystm1Q8K353 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cystm1Q8K353 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cystm1Q8K353 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cystm1Q8K353 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cystm1Q8K353 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cystm1Q8K353 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cystm1Q8K353 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.89□□□□□ -0.67
Cystm1Q8K353 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cystm1Q8K353 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms