Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cchcr1Q8K2I2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cchcr1Q8K2I2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cchcr1Q8K2I2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cchcr1Q8K2I2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cchcr1Q8K2I2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cchcr1Q8K2I2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Gm6576-201ENSMUST00000169678 883 ntBASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cchcr1Q8K2I2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Gm13158-201ENSMUST00000122007 736 ntBASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cchcr1Q8K2I2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Cchcr1Q8K2I2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cchcr1Q8K2I2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cchcr1Q8K2I2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cchcr1Q8K2I2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.52■□□□□ 0.88
Cchcr1Q8K2I2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cchcr1Q8K2I2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cchcr1Q8K2I2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cchcr1Q8K2I2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Cchcr1Q8K2I2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cchcr1Q8K2I2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cchcr1Q8K2I2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cchcr1Q8K2I2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms