Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgcll1Q8JZS7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcll1Q8JZS7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Hmgcll1Q8JZS7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Gm10013-201ENSMUST00000106074 672 ntBASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Gm22697-201ENSMUST00000175194 63 ntBASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcll1Q8JZS7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcll1Q8JZS7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.83■□□□□ 0.45
Hmgcll1Q8JZS7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcll1Q8JZS7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcll1Q8JZS7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcll1Q8JZS7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcll1Q8JZS7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hmgcll1Q8JZS7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcll1Q8JZS7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms