Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfwd3Q8CIK8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.33■□□□□ 0.21
Rfwd3Q8CIK8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfwd3Q8CIK8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfwd3Q8CIK8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfwd3Q8CIK8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Gm12382-201ENSMUST00000122005 922 ntBASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfwd3Q8CIK8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Gm6576-201ENSMUST00000169678 883 ntBASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfwd3Q8CIK8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Rfwd3Q8CIK8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Mir1199-201ENSMUST00000117015 119 ntBASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms