Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rp1l1Q8CGM2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rp1l1Q8CGM2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Rp1l1Q8CGM2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.08■□□□□ 0.48
Rp1l1Q8CGM2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rp1l1Q8CGM2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Phf7-203ENSMUST00000226565 1971 ntBASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Gm4995-201ENSMUST00000117247 432 ntBASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Mir5131-201ENSMUST00000175426 93 ntBASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rp1l1Q8CGM2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rp1l1Q8CGM2 Gm27000-201ENSMUST00000182943 842 ntBASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Gm1401-201ENSMUST00000122048 772 ntBASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Gm11594-201ENSMUST00000122313 162 ntBASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rp1l1Q8CGM2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rp1l1Q8CGM2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.04■□□□□ 0.48
Rp1l1Q8CGM2 Gm18421-201ENSMUST00000204122 625 ntBASIC18.04■□□□□ 0.48
Rp1l1Q8CGM2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.04■□□□□ 0.48
Rp1l1Q8CGM2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.04■□□□□ 0.48
Rp1l1Q8CGM2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rp1l1Q8CGM2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rp1l1Q8CGM2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Gm11779-201ENSMUST00000118541 368 ntBASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rp1l1Q8CGM2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rp1l1Q8CGM2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rp1l1Q8CGM2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rp1l1Q8CGM2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms