Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Q8CD60 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Q8CD60 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.23■□□□□ 0.51
Q8CD60 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.23■□□□□ 0.51
Q8CD60 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Q8CD60 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.22■□□□□ 0.51
Q8CD60 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Q8CD60 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Q8CD60 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.22■□□□□ 0.51
Q8CD60 Mir5122-201ENSMUST00000175004 89 ntBASIC18.22■□□□□ 0.51
Q8CD60 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Q8CD60 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.22■□□□□ 0.51
Q8CD60 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.22■□□□□ 0.51
Q8CD60 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Q8CD60 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.21■□□□□ 0.51
Q8CD60 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.21■□□□□ 0.51
Q8CD60 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.21■□□□□ 0.51
Q8CD60 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Q8CD60 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Q8CD60 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Q8CD60 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Q8CD60 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Q8CD60 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.2■□□□□ 0.5
Q8CD60 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.2■□□□□ 0.5
Q8CD60 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Q8CD60 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Q8CD60 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Q8CD60 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.19■□□□□ 0.5
Q8CD60 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.19■□□□□ 0.5
Q8CD60 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.19■□□□□ 0.5
Q8CD60 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.19■□□□□ 0.5
Q8CD60 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Q8CD60 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.19■□□□□ 0.5
Q8CD60 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Q8CD60 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.19■□□□□ 0.5
Q8CD60 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.19■□□□□ 0.5
Q8CD60 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Q8CD60 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms