Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp20Q8C6M1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Gm7370-201ENSMUST00000219471 767 ntBASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp20Q8C6M1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp20Q8C6M1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Gm16061-201ENSMUST00000122167 857 ntBASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Gm33142-201ENSMUST00000193913 867 ntBASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp20Q8C6M1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Usp20Q8C6M1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp20Q8C6M1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Usp20Q8C6M1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp20Q8C6M1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp20Q8C6M1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp20Q8C6M1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp20Q8C6M1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms