Protein–RNA interactions for Protein: Q8C0S4

Ttc21a, Tetratricopeptide repeat protein 21A, mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc21aQ8C0S4 AC120002.2-201ENSMUST00000220205 773 ntBASIC22.12■■□□□ 1.13
Ttc21aQ8C0S4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ttc21aQ8C0S4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ttc21aQ8C0S4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ttc21aQ8C0S4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ttc21aQ8C0S4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Gm27463-201ENSMUST00000183569 57 ntBASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ttc21aQ8C0S4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ttc21aQ8C0S4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ttc21aQ8C0S4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ttc21aQ8C0S4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ttc21aQ8C0S4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ttc21aQ8C0S4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc21aQ8C0S4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Gm7889-201ENSMUST00000185591 958 ntBASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ttc21aQ8C0S4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc21aQ8C0S4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC22.05■■□□□ 1.12
Ttc21aQ8C0S4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc21aQ8C0S4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.05■■□□□ 1.12
Ttc21aQ8C0S4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.05■■□□□ 1.12
Ttc21aQ8C0S4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc21aQ8C0S4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc21aQ8C0S4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms