Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fam43aQ8BUP8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fam43aQ8BUP8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Fam43aQ8BUP8 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.36■□□□□ 0.69
Fam43aQ8BUP8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Fam43aQ8BUP8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fam43aQ8BUP8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam43aQ8BUP8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Fam43aQ8BUP8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Fam43aQ8BUP8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Gm10602-201ENSMUST00000098239 609 ntBASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam43aQ8BUP8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam43aQ8BUP8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Fam43aQ8BUP8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms