Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.76■□□□□ 0.27
Rnf38Q8BI21 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Gm11927-201ENSMUST00000118472 759 ntBASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Gm26524-201ENSMUST00000192339 390 ntBASIC16.75■□□□□ 0.27
Rnf38Q8BI21 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf38Q8BI21 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf38Q8BI21 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rnf38Q8BI21 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Flg-201ENSMUST00000050758 1488 ntBASIC16.72■□□□□ 0.27
Rnf38Q8BI21 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf38Q8BI21 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf38Q8BI21 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms