Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf168Q80XJ2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Rnf168Q80XJ2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf168Q80XJ2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf168Q80XJ2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf168Q80XJ2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm10418-201ENSMUST00000100943 576 ntBASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm10013-201ENSMUST00000106074 672 ntBASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm29791-202ENSMUST00000207888 369 ntBASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm18032-201ENSMUST00000222541 538 ntBASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf168Q80XJ2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Gm2274-201ENSMUST00000184539 609 ntBASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Gm21362-201ENSMUST00000194272 928 ntBASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf168Q80XJ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rnf168Q80XJ2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Gm23634-201ENSMUST00000175071 91 ntBASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Mir5130-201ENSMUST00000175160 84 ntBASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf168Q80XJ2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms