Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Flg-201ENSMUST00000050758 1488 ntBASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Gm10418-201ENSMUST00000100943 576 ntBASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Mtag2-201ENSMUST00000058665 714 ntBASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Gm11927-201ENSMUST00000118472 759 ntBASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Rab3c-203ENSMUST00000224180 967 ntBASIC19.17■□□□□ 0.66
Krt39Q6IFX4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms