Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt39Q6IFX4 Flg-201ENSMUST00000050758 1488 ntBASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Krt39Q6IFX4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Gm10418-201ENSMUST00000100943 576 ntBASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Mtag2-201ENSMUST00000058665 714 ntBASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt39Q6IFX4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Gm11927-201ENSMUST00000118472 759 ntBASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Krt39Q6IFX4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt39Q6IFX4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Krt39Q6IFX4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Rab3c-203ENSMUST00000224180 967 ntBASIC19.17■□□□□ 0.66
Krt39Q6IFX4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt39Q6IFX4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krt39Q6IFX4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms