Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.32□□□□□ -0.28
Notch3Q61982 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.32□□□□□ -0.28
Notch3Q61982 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Notch3Q61982 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.31□□□□□ -0.28
Notch3Q61982 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Notch3Q61982 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.31□□□□□ -0.28
Notch3Q61982 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Notch3Q61982 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Notch3Q61982 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Notch3Q61982 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Notch3Q61982 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Notch3Q61982 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Gm38027-201ENSMUST00000192315 235 ntBASIC13.3□□□□□ -0.28
Notch3Q61982 Gm18959-201ENSMUST00000208954 655 ntBASIC13.3□□□□□ -0.28
Notch3Q61982 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.3□□□□□ -0.28
Notch3Q61982 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.3□□□□□ -0.28
Notch3Q61982 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 AA414768-201ENSMUST00000121924 1257 ntBASIC13.3□□□□□ -0.28
Notch3Q61982 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Notch3Q61982 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Notch3Q61982 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Notch3Q61982 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Notch3Q61982 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Notch3Q61982 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Gm25016-201ENSMUST00000158399 131 ntBASIC13.29□□□□□ -0.28
Notch3Q61982 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Notch3Q61982 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.29□□□□□ -0.28
Notch3Q61982 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Notch3Q61982 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Mir2861-201ENSMUST00000175539 82 ntBASIC13.29□□□□□ -0.28
Notch3Q61982 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Notch3Q61982 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.29□□□□□ -0.28
Notch3Q61982 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.29□□□□□ -0.28
Notch3Q61982 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.29□□□□□ -0.28
Notch3Q61982 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.28□□□□□ -0.28
Notch3Q61982 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.28□□□□□ -0.28
Notch3Q61982 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Notch3Q61982 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.28□□□□□ -0.28
Notch3Q61982 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.28□□□□□ -0.28
Notch3Q61982 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.28□□□□□ -0.28
Notch3Q61982 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Notch3Q61982 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Notch3Q61982 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Notch3Q61982 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Notch3Q61982 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Notch3Q61982 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Notch3Q61982 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Notch3Q61982 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Notch3Q61982 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Notch3Q61982 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Notch3Q61982 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Notch3Q61982 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms