Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox17Q61473 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.35■□□□□ 0.21
Sox17Q61473 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox17Q61473 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox17Q61473 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox17Q61473 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox17Q61473 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.34■□□□□ 0.21
Sox17Q61473 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sox17Q61473 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Sox17Q61473 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox17Q61473 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox17Q61473 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox17Q61473 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sox17Q61473 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox17Q61473 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox17Q61473 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox17Q61473 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sox17Q61473 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox17Q61473 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox17Q61473 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox17Q61473 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox17Q61473 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox17Q61473 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.33■□□□□ 0.2
Sox17Q61473 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox17Q61473 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.33■□□□□ 0.2
Sox17Q61473 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Sox17Q61473 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sox17Q61473 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Sox17Q61473 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.32■□□□□ 0.2
Sox17Q61473 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sox17Q61473 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.32■□□□□ 0.2
Sox17Q61473 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox17Q61473 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox17Q61473 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox17Q61473 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.31■□□□□ 0.2
Sox17Q61473 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Sox17Q61473 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox17Q61473 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Sox17Q61473 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sox17Q61473 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox17Q61473 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox17Q61473 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sox17Q61473 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox17Q61473 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
Sox17Q61473 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox17Q61473 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox17Q61473 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox17Q61473 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms