Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Mir1199-201ENSMUST00000117015 119 ntBASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna2d4Q5RJF7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna2d4Q5RJF7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna2d4Q5RJF7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Gm10517-202ENSMUST00000192970 758 ntBASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cacna2d4Q5RJF7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna2d4Q5RJF7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna2d4Q5RJF7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Gm4974-201ENSMUST00000209974 875 ntBASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna2d4Q5RJF7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna2d4Q5RJF7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Cacna2d4Q5RJF7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna2d4Q5RJF7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cacna2d4Q5RJF7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna2d4Q5RJF7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.29■□□□□ 0.68
Cacna2d4Q5RJF7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cacna2d4Q5RJF7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms