Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-3Q5R1C3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Serp2-204ENSMUST00000228055 705 ntBASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-3Q5R1C3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3-3Q5R1C3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms