Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trdv2-2Q5R1A4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trdv2-2Q5R1A4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trdv2-2Q5R1A4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trdv2-2Q5R1A4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trdv2-2Q5R1A4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trdv2-2Q5R1A4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trdv2-2Q5R1A4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Idnk-204ENSMUST00000226010 1898 ntBASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trdv2-2Q5R1A4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trdv2-2Q5R1A4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Gm42778-201ENSMUST00000199644 553 ntBASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-2Q5R1A4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdv2-2Q5R1A4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms