Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr1d1Q3UV55 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Gm13168-201ENSMUST00000121771 632 ntBASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Gm6420-201ENSMUST00000193885 723 ntBASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nr1d1Q3UV55 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nr1d1Q3UV55 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nr1d1Q3UV55 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Gm13146-201ENSMUST00000118508 780 ntBASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Nr1d1Q3UV55 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Gm20049-201ENSMUST00000219950 730 ntBASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1d1Q3UV55 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms